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Genome Biology Track

Track Leader

Dr. Devine
Scott Devine, Ph.D.
801 W. Baltimore Street, Room #615
(410) 706-2343
sdevine@som.umaryland.edu  

Recent advances in next-generation DNA sequencing and bioinformatics are transforming the biomedical sciences. These technologies are being used to sequence and analyze genomes at unprecedented rates and we are rapidly approaching an era in which human genome sequences will be used routinely to diagnose diseases and predict the future health of individuals. The Genome Biology Track of the Molecular Medicine Program offers doctoral training in this rapidly-evolving area. This track is part of a campus-wide graduate program, with participating faculty drawn from diverse departments, centers, and institutes at the University of Maryland, Baltimore. Fourteen members of our faculty are affiliated with the Institute for Genome Sciences (IGS), which has established an exceptional environment for conducting genomics and computational biology studies on campus. The IGS has made significant investments in genome sequencing platforms (Sanger, 454, Illumina HiSeq, and PacBioRS) and an extensive computational grid. Students can gain hands-on experience with these tools and learn how to apply these platforms to biological questions. Affiliated faculty study a range of research topics with an emphasis on exploring questions related to human health and disease.

Faculty interests include:

  • Cancer genomics Tumor genome and transcriptome sequencing; genome mutagenesis, instability and repair; tumor suppressors and oncogenes; gene networks; signaling pathways; genomics-based drug discovery and treatment
  • Human genomicsHuman genome and transcriptome sequencing; genetic variation; GWAS studies; predictive health and personalized medicine
  • Microbial genomicsThe human microbiome in health and disease; pathogenic microorganisms (including yeast and bacteria); host/pathogen interactions; archaea; extremophiles; viruses & phages; bioterrorism
  • Model organism genomicsStudies conducted in yeast, flies, worms, and mice exploiting the outstanding genomics resources that have been developed for these organisms (genome sequences, gene annotations, gene knockout collections, plasmid collections, etc.)
  • Evolutionary and comparative genomicsSequence comparisons across species to study gene, protein, and genome evolution
  • Genetics, molecular biology, biochemistryBasic molecular processes surrounding gene and genome function such as RNA transcription, gene regulation, DNA damage and repair, DNA folding/packaging, and chromosome function

Apply to the Molecular Medicine Program. 

Please feel free to contact the track leader of this research track with any questions that you have.

Genome track